This page contains updated data regarding recent segmental duplications in Platypus   It focuses on genomic duplications >1000bp and >90% identity.

Platypus WGAC Data Access (produced on June 2007)

UCSC Genome Browser

This allows browsing of the Platypus genome.

Parasight Views showing Inter & Intra Duplication

Inter and Intra chromosome duplications from the perspective of individual chromosome. The assembly duplications (red and blue for inter and intra chromosome respectively) are shown at various length thresholds.  


Analysis on various KB-Group Breakdowns 

WGAC Length Distribution

Analysis on distribution of number of pairs at different length categories. 

WGAC Similarity distributions

Analysis on distribution of number of pairs at different Percent Similarity. 

Non-redundant Duplication Ratios

Information of WGAC Pairs mapped to Chromosome only

This file contains only WGACs identified on sequences assigned to chromosomes. It contains a small portion of the WGACs in the file below. 

Information of all WGAC Pairs including those on Ultra contig and contigs

This is a tab delimited text file. During the process, all contigs has been concatenated into three large contigs. 

contigs concatenation log file

The contigs concatenate log file contains location information of each contigs in concatenated contigs.