This page contains updated data regarding recent segmental duplications(WGAC and WSSD) in Dog assembly(The May 2005 dog (Canis familiaris) whole genome shotgun (WGS) assembly v2.0 was sequenced and assembled by the Broad Institute of MIT/Harvard and Agencourt Bioscience). WGAC focuses on genomic duplications >1000bp and >90% identity.
Data Access
UCSC Genome BrowserThis allows browsing of the Dog(canFam2) genome.
Data for all WGAC Seg Dup pairsA flat text file contains chromosome location and coresponding cordinates for all WGAC Seg Dup pairs.
Data for canFame2 Divergence WSSDA flat text file contains chromosome location and coresponding cordinates for divergence WSSD.
Data for canFam2 Depth Coverage WSSDA flat text file contains chromosome location and coresponding cordinates for depth coverage WSSD.